BSgenome.Mmusculus.UCSC.mm10

This is the released version of BSgenome.Mmusculus.UCSC.mm10; for the devel version, see BSgenome.Mmusculus.UCSC.mm10.

Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)

Bioconductor version: Release (3.20)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, based on GRCm38.p6) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm10")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Mmusculus.UCSC.mm10")

For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual	PDF

biocViews	AnnotationData, BSgenome, Genetics, Mus_musculus
Version	1.4.3
License	Artistic-2.0
Depends	R (>= 3.5.0), BSgenome(>= 1.60.0)
Imports	BSgenome
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me	BSgenome.Mmusculus.UCSC.mm10.masked
Imports Me	epiregulon, musicatk, BSgenome.Mmusculus.UCSC.mm10.masked
Suggests Me	AneuFinder, BSgenome, circRNAprofiler, cliProfiler, crisprDesign, CRISPRseek, enhancerHomologSearch, EpiCompare, factR, gcapc, GenomicRanges, GRaNIE, HiCDCPlus, InPAS, m6Aboost, MiRaGE, monaLisa, Motif2Site, multicrispr, NADfinder, periodicDNA, plyinteractions, scanMiRApp, scmeth, SCOPE, ICAMS, MicroSEC
Links To Me

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Mmusculus.UCSC.mm10_1.4.3.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm10/
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