MSstatsQC

This is the released version of MSstatsQC; for the devel version, see MSstatsQC.

Longitudinal system suitability monitoring and quality control for proteomic experiments

Bioconductor version: Release (3.20)

MSstatsQC is an R package which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.

Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]

Maintainer: Eralp Dogu <eralp.dogu at gmail.com>

Citation (from within R, enter citation("MSstatsQC")):

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsQC")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsQC")

biocViews	MassSpectrometry, Proteomics, QualityControl, Software
Version	2.24.0
In Bioconductor since	BioC 3.6 (R-3.4) (7 years)
License	Artistic License 2.0
Depends	R (>= 3.5.0)
Imports	dplyr, plotly, ggplot2, ggExtra, stats, grid, MSnbase, qcmetrics
System Requirements
URL	http://msstats.org/msstatsqc
Bug Reports	https://groups.google.com/forum/#!forum/msstatsqc

Suggests	knitr, rmarkdown, testthat, RforProteomics
Linking To
Enhances
Depends On Me
Imports Me	MSstatsQCgui
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	MSstatsQC_2.24.0.tar.gz
Windows Binary (x86_64)	MSstatsQC_2.24.0.zip (64-bit only)
macOS Binary (x86_64)	MSstatsQC_2.24.0.tgz
macOS Binary (arm64)	MSstatsQC_2.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MSstatsQC
Source Repository (Developer Access)	git clone [email protected]:packages/MSstatsQC
Bioc Package Browser	https://code.bioconductor.org/browse/MSstatsQC/
Package Short Url	https://bioconductor.org/packages/MSstatsQC/
Package Downloads Report	Download Stats